细胞计算的能量成本 (2012)
The Energetic Costs of Cellular Computation (2012)

原始链接: https://arxiv.org/abs/1203.5426

在本文中,Pankaj Mehta 和 David J. Schwab 探讨了细胞计算的能量需求,特别关注了细胞如何测定外部化学配体的浓度。基于兰道尔原理(Landauer’s Principle,即信息处理具有物理成本),作者分析了一个模仿经典 Berg-Purcell 感知策略的双组分细胞网络。 研究表明,细胞若要获取环境信息,就必须打破细致平衡并消耗代谢能量。作者揭示了计算精度与能量消耗之间的直接相关性,指出对环境的“学习”水平越高,所需的能量消耗就越大。这些发现表明,能量约束在细胞网络的演化中起着关键作用,特别是对于在资源匮乏环境下生存的生物(如孢子萌发过程中的细菌)而言。通过量化这些成本,本文阐述了物理和热力学限制如何塑造生物信息处理系统的设计与功能。

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Abstract:Cells often perform computations in response to environmental cues. A simple example is the classic problem, first considered by Berg and Purcell, of determining the concentration of a chemical ligand in the surrounding media. On general theoretical grounds (Landuer's Principle), it is expected that such computations require cells to consume energy. Here, we explicitly calculate the energetic costs of computing ligand concentration for a simple two-component cellular network that implements a noisy version of the Berg-Purcell strategy. We show that learning about external concentrations necessitates the breaking of detailed balance and consumption of energy, with greater learning requiring more energy. Our calculations suggest that the energetic costs of cellular computation may be an important constraint on networks designed to function in resource poor environments such as the spore germination networks of bacteria.
From: Pankaj Mehta [view email]
[v1] Sat, 24 Mar 2012 15:52:10 UTC (652 KB)
[v2] Wed, 4 Apr 2012 14:21:24 UTC (652 KB)
[v3] Tue, 10 Apr 2012 16:26:01 UTC (652 KB)
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