突如其来的激增塑造进化树
The Sudden Surges That Forge Evolutionary Trees

原始链接: https://www.quantamagazine.org/the-sudden-surges-that-forge-evolutionary-trees-20250828/

最近的研究支持**间断平衡**理论——即进化并非一个缓慢、稳定的过程,而是以长期的稳定期为特征,并伴随着快速变化的爆发。一个新的数学框架,基于埃尔德里奇和古尔德的工作,证明这些“进化高峰”并非随机发生,而是倾向于聚集在新物种分化点附近。 该模型结合了古生物学和分子数据,揭示蛋白质、语言,甚至头足类动物(鱿鱼、章鱼)的多样形式在分裂成新物种*之后*进化最快。这并非与自然选择分离的过程,而是强烈适应性驱动快速变化时期。 这项研究表明,进化变化是可预测的,并且与“生命之树”的分支点相关联,从而对复杂生命形式的起源提供了更细致的理解,并挑战了传统的达尔文渐进主义。研究人员正在应用这个框架来理解生命起源的基本方面,例如遗传密码的进化。

《量子》杂志最近的一篇文章讨论了进化树并非通过渐进变化构建,而是通过“突发涌现”的快速进化构建的。这个想法并非全新——“间断平衡”的概念已经存在了一个世纪——但新的建模正在探索这些涌现*如何*发生。 该模型表明,显著的突变可以将一个种群推入一个新的“相空间”,从而实现更快的适应性增益和分化。评论员指出,环境变化和遗传隔离是这些事件的关键驱动因素。隔离,无论是通过地理屏障还是生殖不相容(如多倍体植物),都会降低遗传多样性,使种群更容易受到有影响的突变和生态变化的影响。 然而,一些人警告说,模拟这些效应并不一定证明它们发生在自然界中,这与动物研究的局限性相呼应。这场讨论凸显了突变、环境和种群动态在塑造生命进化中的复杂相互作用。
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原文

Over the last half-billion years, squid, octopuses and their kin have evolved much like a fireworks display, with long, anticipatory pauses interspersed with intense, explosive changes. The many-armed diversity of cephalopods is the result of the evolutionary rubber hitting the road right after lineages split into new species, and precious little of their evolution has been the slow accumulation of gradual change.

They aren’t alone. Sudden accelerations spring from the crooks of branches in evolutionary trees, across many scales of life — seemingly wherever there’s a branching system of inherited modifications — in a dynamic not examined in traditional evolutionary models.

That’s the perspective emerging from a new mathematical framework published in Proceedings of the Royal Society B that describes the pace of evolutionary change. The new model, part of a roughly 50-year-long reimagining of evolution’s tempo, is rooted in the concept of punctuated equilibrium, which was introduced by the paleontologists Niles Eldredge and Stephen Jay Gould in 1972.

“Species would just sit still in the fossil record for millions of years, and then all of a sudden — bang! — they would turn into something else,” explained Mark Pagel, an evolutionary biologist at the University of Reading in the United Kingdom.

Punctuated equilibrium was initially a controversial proposal. The theory diverged from the dominant, century-long view that evolution adhered to a slow, steady pace of Darwinian gradualism, in which species incrementally and almost imperceptibly developed into new ones. It opened the confounding possibility that there was a discontinuity between the selection processes behind the microevolutionary changes that occur within a population and those driving the long-term, broad-scale changes that take place higher than the species level, known as macroevolution.

In the decades since, researchers have continued to debate these views as they’ve gathered more data: Paleontologists have accumulated fossil datasets tracing macroevolutionary changes in ancient lineages, while molecular biologists have reconstructed microevolution on a more compressed timescale — in DNA and the proteins they encode.

Now there are enough datasets to more fully test the theories of evolutionary change. Recently, a team of scientists blended insights from several evolutionary models with new methods to build a mathematical framework that better captures real evolutionary processes. When the team applied their tools to a selection of evolutionary datasets (including their own data from research into an ancient protein family), they found that evolutionary spikes weren’t just common, but somewhat predictably clustered at the forks in the evolutionary tree.

Their model showed that proteins contort themselves into new iterations more rapidly around the time they diverge from each other. Human languages twist and recast themselves at the bifurcations in their own family tree. Cephalopods’ soft bodies sprout arms and bloom with suckers at these same splits.

The new study adds to previous support for the punctuated equilibrium phenomenon, said Pagel, who wasn’t involved in the project. However, the rapid evolutionary behavior isn’t a unique process separate from natural selection, as Eldredge and Gould suggested, but rather the result of periods of extremely rapid adaptation propelling evolutionary change.

“This is really a rather beautiful story in the philosophy of science,” Pagel said.

Jordan Douglas, an evolutionary biologist at the Australian National University in Canberra, is fascinated by the origins of the genetic code. To understand those first stages of life’s evolution, he studies aminoacyl-tRNA synthetases (aaRSs), a family of enzymes essential to building proteins. The aaRS enzymes appear to predate the last universal common ancestor for all life on the planet.

“These enzymes are responsible for creating that kind of reflexive logic that nature uses to build itself, by helping to translate RNA into proteins which copy RNA, which build more proteins, which copy more RNA,” Douglas said.

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